The reality is that gig ethernet is what you'll be running for many years to come, so i'd say Cat5e is perfect for your application. 10 gig ethernet has been around for 15 years, and *still* isn't normal - go and try to buy an 8 port 10 gig ethernet switch on amazon and see how many hits you have... The commercial use of 10 gig ethernet has agreed that fibre is the answer, so racks of servers are full of SFP+ ports and fibre cabling, not twisted pairs with their implied crosstalk and limitations.
For a home install, be aware that the long runs of cable are likely to be solid core and designed for installation. This cable type is not very flexible, and fails with repeated bending, so you might want to find some longer patch cable runs which would be better if you have a point to point run. If you want to do it properly with solid core stuff, then you'll want proper wall mounted faceplates, or if you have lots of runs you'll want to think about an ethernet patchbay.
Oh, and if you are going to the trouble of pulling cables through, pull multiple runs as that way you will have a spare if you have problems in the future...